Saturday, October 29, 2011

Topic Biomolecule Essay - Main Points!

Describe the differences between amino acids and nucleotides
Main points
Key idea:
Components
(each) Amino acid:
· Has an amino (NH) gp, a carboxyl (COOH) gp, a H atom & a R gp attached to a central α carbon atom
(each) Nucleotide:
· Made up of a pentose sugar, a nitrogenous base & a phosphate gp
· Ref to 3 phosphate gps in each ‘free’ nucleotide
Key idea:
Ionization
Amino acids:
· In H2O, COOH & NH gps ionize, form –ve charged & +ve charged gp, respectively
· Ref to amphoteric property (i.e. –ve charged COOH accepting a H+, -ve charged NH donating H+); i.e. aa act as pH buffer
Nucleotides:
· In H2O, the phosphate gp is -ve charged, hence nucleotide is soluble in H2O
· Also result in net -ve charges of RNA & DNA polynucleotides (DNA migrate toward +ve electrode during gel electrophoresis due to -ve charges along sugar phosphate backbone)
Key idea:
Types 
Amino acids:
· 20 (naturally occurring) aa distinguished by identity of R gp
· Ref to aa categorized into polar uncharged, non-polar uncharged & charged (basic or acidic) aa
Nucleotides:
· 4 diff types of nucleotides in DNA distinguished by base - cytosine, guanine, thymine & adenine
· In RNA, bases are same except for uracil replacing thymine
Key idea:
Formation of bonds
Amino acids:
· Diff R gps allow for formation of ionic, H, disulfide bonds or hydrophobic interactions b/w aa; result - sec, tertiary & quarternary struc of a protein
Nucleotides:
· H bonds b/w complementary bases (C and G, A and T), result - formation of double helix struc of DNA
Comments:
(i) Visualize the answer with the aid of a labelled diagram.
(ii) Verbalize the answer + write down the main points w/o referring to the answer (use abbreviations)
(iii) Read again within the next 24h & once more within 72h (do not spend more than 10min)
(iv) For this type of essay question, you could answer in a table format too
(v) If time permits, draw and label a general amino acid and nucleotide

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